BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032F11LP1|AL429611
(750 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1265 1458 0.0
>3x_Contig1265
Length = 8324
Score = 1458 bits (732), Expect = 0.0
Identities = 742/748 (99%)
Strand = Plus / Plus
Query: 1 ttaacattgatkccaaaccataactgtggtttttcctgaatgcattccatcaattgtttc 60
|||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4637 ttaacattcttgccaaaccataactgtggtttttcctgaatgcattccatcaattgtttc 4696
Query: 61 aaccacactgcaatactagctggatctgaagtgtccagtccagccacataaaaaaaggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4697 aaccacactgcaatactagctggatctgaagtgtccagtccagccacataaaaaaaggag 4756
Query: 121 ccgacggttttcttttgagagtcgtgcttcgcaatggtgaccaaatcctggggacctaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4757 ccgacggttttcttttgagagtcgtgcttcgcaatggtgaccaaatcctggggacctaag 4816
Query: 181 ctagctacaaactccggatcagataattttgcaatacgtccattgaaagcttgaccgggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4817 ctagctacaaactccggatcagataattttgcaatacgtccattgaaagcttgaccgggt 4876
Query: 241 gtctcttcaacaactctgtaattatcaacttgcacttcattcatatttttctaagatcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4877 gtctcttcaacaactctgtaattatcaacttgcacttcattcatatttttctaagatcat 4936
Query: 301 tggactcagtaggaagggtgtgacttcttaacaaggtgcctttttttgtcttggacaagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4937 tggactcagtaggaagggtgtgacttcttaacaaggtgcctttttttgtcttggacaagt 4996
Query: 361 tgctctacacatttcccaccaaagtagtcaatgtcctcagtttttgaatgaaggtatagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4997 tgctctacacatttcccaccaaagtagtcaatgtcctcagtttttgaatgaaggtatagc 5056
Query: 421 gttgttatgttagtaattgtgccatttaattcgaaacacgtcctagtgtgacctaaaacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5057 gttgttatgttagtaattgtgccatttaattcgaaacacgtcctagtgtgacctaaaacc 5116
Query: 481 ccagaaaacgagagaatacatactccggaattgagtcctgtgatagagmcattgttgatg 540
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 5117 ccagaaaacgagagaatacatactccggaattgagtcctgtgatagagccattgttgatg 5176
Query: 541 atwgatgtwccttgatctgttactgctttatactatgtggtttatgcaaagcatgggacg 600
|| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5177 attgatgttccttgatctgttactgctttatactatgtggtttatgcaaagcatgggacg 5236
Query: 601 ccactggcaagtttgttcatcttgcgaaggtgtgcagtttattcatagaaatcgttttca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5237 ccactggcaagtttgttcatcttgcgaaggtgtgcagtttattcatagaaatcgttttca 5296
Query: 661 tttcttcgaaagatgatattatagtaatgataataataatacgtaagtgtaaaagagaaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5297 tttcttcgaaagatgatattatagtaatgataataataatacgtaagtgtaaaagagaaa 5356
Query: 721 aaaagaccaggtaaccaaatatatataa 748
||||||||||||||||||||||||||||
Sbjct: 5357 aaaagaccaggtaaccaaatatatataa 5384
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6297
Number of Sequences: 1807
Number of extensions: 6297
Number of successful extensions: 151
Number of sequences better than 1.0e-20: 1
length of query: 750
length of database: 10,358,551
effective HSP length: 16
effective length of query: 734
effective length of database: 10,329,639
effective search space: 7581955026
effective search space used: 7581955026
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)